Browncroft supports missionaries sent by many different missionary agencies. The following list represents the current set of associated mission agencies.

• Africa Inland Mission
• AlongSide Asia (no website)
• Camp Cherith
• Camp Hickory Hill
• Campus Crusade for Christ
• Christian Mission for the United Nations Community
• Christian Mission in Many Lands, Inc.
• Christar
• Christian Service Brigade
• Church Resource Ministries
• CompassCare Pregnancy Center
• Crescendo Ministries
• CrossWorld
• EFCA International Mission
• Entrust
• Global Outreach
• GO International
• Good News Jail and Prison Ministry
• Greater Europe Mission (GEM)
• Greater Rochester Youth For Christ
• HCJB-Global Radio Missionary Fellowship
• InterVarsity Christian Fellowship
• JAARS
• Josiah Venture
• Mission Aviation Fellowship
• The Navigators
• Open Door Mission
• Operation Mobilization
• Palm Missionary Ministries
• Partners International 
• Patkai Christian College
• PIONEERS
• ReachGlobal
• Reconciliation Ministries Network
• Resourcing Christian Education International
• Ripe For Harvest
• Rochester Family Mission
• SEND International
• SIL
• SIM
• Slavic Gospel Association
• WEC International
• Word of Life
• Wycliffe Bible Translators
• Young Life
• Young Life - Rochester East
• Youth For Christ
• YWAM
• Zion Fellowship